<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-13000" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2025-09-09</depositionDate>
            <releaseDate>2026-03-01</releaseDate>
            <updateDate>2026-03-01</updateDate>
        </keyDates>
        <title>Human TRPM4 ion channel in MSP2N2 lipid nanodisc in a calcium-bound state</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0003-3691-5010</authorORCID>
            <firstName>Henriette</firstName>
            <middleName>Elisabeth</middleName>
            <lastName>Autzen</lastName>
            <organization type="academic">University of Copenhagen</organization>
            <street>Blegdamsvej 3B, 2200 Copenhagen N</street>
            <townOrCity>Copenhagen</townOrCity>
            <country>Denmark</country>
            <postOrZipCode>2200</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-3691-5010</authorORCID>
            <firstName>Henriette</firstName>
            <middleName>Elisabeth</middleName>
            <lastName>Autzen</lastName>
            <organization type="academic">University of Copenhagen</organization>
            <street>Blegdamsvej 3B, 2200 Copenhagen N</street>
            <townOrCity>Copenhagen</townOrCity>
            <country>Denmark</country>
            <postOrZipCode>2200</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-6280-2223">Pugh CF</author>
            <author>Feilen LP</author>
            <author authorORCID="0000-0001-5794-4422">Živković D</author>
            <author>Præstegaard KF</author>
            <author>Sideris C</author>
            <author>Borthwick NJ</author>
            <author>de Lichtenberg C</author>
            <author authorORCID="0000-0003-4346-182X">Bolla JR</author>
            <author authorORCID="0000-0001-6728-5299">Autzen AAA</author>
            <author authorORCID="0000-0003-3691-5010">Autzen HE</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>Novo Nordisk Foundation</fundingBody>
                <code>NNF20OC0060692</code>
                <country>Denmark</country>
            </grantReference>
            <grantReference>
                <fundingBody>The Carlsberg Foundation</fundingBody>
                <code>CF20-0533</code>
                <country>Denmark</country>
            </grantReference>
            <grantReference>
                <fundingBody>Danish Council for Independent Research</fundingBody>
                <code>1131-00023</code>
                <country>Denmark</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">3.8</datasetSize>
        <entryDOI>10.6019/EMPIAR-13000</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-55036</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="false" preprint="false">
                    <author authorORCID="0000-0002-6280-2223" order="1">Pugh CF</author>
                    <author order="2">Feilen LP</author>
                    <author authorORCID="0000-0001-5794-4422" order="3">Živković D</author>
                    <author order="4">Præstegaard KF</author>
                    <author order="5">Sideris C</author>
                    <author order="6">Borthwick NJ</author>
                    <author order="7">de Lichtenberg C</author>
                    <author authorORCID="0000-0003-4346-182X" order="8">Bolla JR</author>
                    <author authorORCID="0000-0001-6728-5299" order="9">Autzen AAA</author>
                    <author authorORCID="0000-0003-3691-5010" order="10">Autzen HE</author>
                    <title>MAASTY: A (dis)ordered copolymer for structural determination of human membrane proteins in native nanodiscs</title>
                    <journal>Nature Communications</journal>
                    <journalAbbreviation>Nat. Comms.</journalAbbreviation>
                    <country></country>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame micrographs of hTRPM4 in MSP2n" nanodiscs in Ca2+-bound state</name>
        <directory>/data/20230428_TRPM4_CA_MSP_Grid1_krios-UCPH_raw</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>EER</headerFormat>
        <dataFormat>EER</dataFormat>
        <numImagesOrTiltSeries>7945</numImagesOrTiltSeries>
        <framesPerImage>40</framesPerImage>
        <voxelType>BIT</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>0.725</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>0.725</pixelHeight>
        </dimensions>
        <details>These are the EER files from Falcon 4i detector - raw micrographs, not motion corrected, acquired with EPU and a total dose of 52 e-/Å2 (1.3 e-/Å2 pr frame)
Gain reference image can be found in the /data/ directory
job028_particles.star contains all picked particles
job034_partciles.star contains the subset of articles from 2D classification (first selection)
job055_particles.star contains the subset of particles from the best classes after 3D classification that was further refined to the final reconstruction (second selection)</details>
        <segmentationList/>
        <micrographsFilePattern>data/20230428_TRPM4_CA_MSP_Grid1_krios-UCPH_raw/GridSquare_*/Data/*_EER.eer</micrographsFilePattern>
        <pickedParticlesFilePattern>data/Particle-stacks/job0*_particles.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/Particle-stacks</pickedParticlesDirectory>
    </imageSet>
</entry>
