<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11996" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2024-03-13</depositionDate>
            <releaseDate>2025-04-15</releaseDate>
            <updateDate>2025-04-15</updateDate>
        </keyDates>
        <title>Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0003-2075-4283</authorORCID>
            <firstName>Jue</firstName>
            <lastName>Chen</lastName>
            <organization type="academic">Department of Membrane Biophysics and Biology</organization>
            <street>1230 York Avenue</street>
            <townOrCity>New York</townOrCity>
            <stateOrProvince>New York</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>10065</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-2075-4283</authorORCID>
            <firstName>Jue</firstName>
            <lastName>Chen</lastName>
            <organization type="academic">Department of Membrane Biophysics and Biology</organization>
            <street>1230 York Avenue</street>
            <townOrCity>New York</townOrCity>
            <stateOrProvince>New York</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>10065</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-8551-0258">Lee J</author>
            <author authorORCID="0000-0002-9672-290X">Oldham ML</author>
            <author>Manon V</author>
            <author authorORCID="0000-0003-2075-4283">Chen J</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>Howard Hughes Medical Institute (HHMI)</fundingBody>
                <code>N/A</code>
                <country>United States</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">8.8</datasetSize>
        <entryDOI>10.6019/EMPIAR-11996</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-41030</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="true">
                    <author authorORCID="0000-0002-8551-0258" order="1">Lee J</author>
                    <author authorORCID="0000-0002-9672-290X" order="2">Oldham ML</author>
                    <author order="3">Manon V</author>
                    <author authorORCID="0000-0003-2075-4283" order="4">Chen J</author>
                    <title>The principles of peptide selection by the transporter associated with antigen processing</title>
                    <journal>bioRxiv</journal>
                    <journalAbbreviation>bioRxiv</journalAbbreviation>
                    <country></country>
                    <year>2023</year>
                    <externalReferences type="doi">10.1101/2023.06.16.545308</externalReferences>
                    <details>This dataset contain the raw 30-frame tif movies collected with a super-resolution pixel size 0.4195 Angstrom (0.839 Angstrom after binning).</details>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame micrographs of the transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL</name>
        <directory>/data</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>26318</numImagesOrTiltSeries>
        <framesPerImage>30</framesPerImage>
        <frameRange>
            <frameRangeMin>1</frameRangeMin>
            <frameRangeMax>30</frameRangeMax>
        </frameRange>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.4195</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.4195</pixelHeight>
        </dimensions>
        <details>The dataset contains super-resolution, raw, uncorrected movies. The super-resolution pixel size is 0.4195 Angstrom before binning (0.839 Angstrom after binning). Gain reference (Gain_Reference_20220908.dm4) is included in the same folder.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
