<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11898" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2024-01-12</depositionDate>
            <releaseDate>2024-03-26</releaseDate>
            <updateDate>2024-03-26</updateDate>
        </keyDates>
        <title>Cryo-EM micrographs of engineered encapsulin P3P4</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0003-2780-1572</authorORCID>
            <firstName>Tadej</firstName>
            <lastName>Satler</lastName>
            <organization type="academic">National Institute of Chemistry</organization>
            <street>Hajdrihova ulica 19</street>
            <townOrCity>Ljubljana</townOrCity>
            <country>Slovenia</country>
            <postOrZipCode>1000</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-6337-5251</authorORCID>
            <firstName>Roman</firstName>
            <lastName>Jerala</lastName>
            <organization type="academic">National Institute of Chemistry</organization>
            <street>Hajdrihova ulica 19</street>
            <townOrCity>Ljubljana</townOrCity>
            <country>Slovenia</country>
            <postOrZipCode>1000</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0003-2780-1572">Satler T</author>
            <author authorORCID="0000-0002-6337-5251">Jerala R</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>Slovenian Research Agency</fundingBody>
                <code>P4-0176</code>
                <country>Slovenia</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="GB">69.3</datasetSize>
        <entryDOI>10.6019/EMPIAR-11898</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-19521</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <nonJournalCitation published="true">
                    <author authorORCID="0000-0003-2780-1572" order="1">Satler T</author>
                    <author authorORCID="0000-0002-6337-5251" order="2">Jerala R</author>
                    <bookTitle>Structure of engineered encapsulin P3P4</bookTitle>
                    <publisher></publisher>
                    <publicationLocation></publicationLocation>
                    <country></country>
                    <details>Published at 10.5281/zenodo.10606158</details>
                </nonJournalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame micrographs of engineered Encapsulin P3P4</name>
        <directory>/data/raw_mics</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>MRC</headerFormat>
        <dataFormat>MRC</dataFormat>
        <numImagesOrTiltSeries>50</numImagesOrTiltSeries>
        <framesPerImage>40</framesPerImage>
        <voxelType>UNSIGNED 16 BIT INTEGER</voxelType>
        <dimensions>
            <imageWidth>variable</imageWidth>
            <pixelWidth>1.2</pixelWidth>
            <imageHeight>variable</imageHeight>
            <pixelHeight>1.2</pixelHeight>
        </dimensions>
        <details>Raw movies of engineered encapsulin P3P4, collected on Galcios 200kV (Cs 2.7), with pixel size 1.2 and total dose 24.37.</details>
        <segmentationList/>
        <micrographsFilePattern>data/raw_mics/*.mrc</micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Aligned multi-frame micrographs of engineered Encapsulin P3P4</name>
        <directory>/data/motioncorr</directory>
        <category>micrographs - single frame</category>
        <headerFormat>MRC</headerFormat>
        <dataFormat>MRC</dataFormat>
        <numImagesOrTiltSeries>50</numImagesOrTiltSeries>
        <framesPerImage>1</framesPerImage>
        <voxelType>32 BIT FLOAT</voxelType>
        <dimensions>
            <imageWidth>variable</imageWidth>
            <pixelWidth>1.2</pixelWidth>
            <imageHeight>variable</imageHeight>
            <pixelHeight>1.2</pixelHeight>
        </dimensions>
        <details>Aligned multi-frame micrographs of engineered Encapsulin P3P4 and picked particles of box size 540 px.</details>
        <segmentationList/>
        <micrographsFilePattern>data/motioncorr/*.mrc</micrographsFilePattern>
        <pickedParticlesFilePattern>data/particles.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/particles</pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Picked particles of engineered Encapsulin P3P4</name>
        <directory>/data/particles</directory>
        <category>picked particles - single frame - processed</category>
        <headerFormat>MRCS</headerFormat>
        <dataFormat>MRCS</dataFormat>
        <numImagesOrTiltSeries>3082</numImagesOrTiltSeries>
        <framesPerImage>1</framesPerImage>
        <voxelType>32 BIT FLOAT</voxelType>
        <dimensions>
            <imageWidth>540</imageWidth>
            <pixelWidth>1.2</pixelWidth>
            <imageHeight>540</imageHeight>
            <pixelHeight>1.2</pixelHeight>
        </dimensions>
        <details>3082 particles extracted from 50 micrographs.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern>data/particles.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/particles</pickedParticlesDirectory>
    </imageSet>
</entry>
