<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11816" schemaVersion="0.65" public="true">
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        <keyDates>
            <depositionDate>2023-12-07</depositionDate>
            <releaseDate>2024-06-04</releaseDate>
            <updateDate>2024-06-04</updateDate>
        </keyDates>
        <title>Cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-4849-4148</authorORCID>
            <firstName>Luke</firstName>
            <lastName>Chao</lastName>
            <organization type="academic">Department of Molecular Biology, Massachusetts General Hospital</organization>
            <street>185 Cambridge Street</street>
            <townOrCity>Boston</townOrCity>
            <stateOrProvince>Massachusetts</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>02114</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-4849-4148</authorORCID>
            <firstName>Luke</firstName>
            <lastName>Chao</lastName>
            <organization type="academic">Department of Molecular Biology, Massachusetts General Hospital</organization>
            <street>185 Cambridge Street</street>
            <townOrCity>Boston</townOrCity>
            <stateOrProvince>Massachusetts</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>02114</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-3209-5492">Fry MY</author>
            <author authorORCID="0000-0002-9123-1132">Navarro PP</author>
            <author authorORCID="0000-0001-5590-1170">Ananda VY</author>
            <author authorORCID="0000-0001-9135-9569">Ge Y</author>
            <author authorORCID="0000-0002-3715-9619">McDonald JL</author>
            <author authorORCID="0000-0002-9018-8179">Hakim P</author>
            <author authorORCID="0000-0002-0107-5181">Luce BE</author>
            <author authorORCID="0000-0003-4655-8096">Lugo CM</author>
            <author authorORCID="0000-0002-4849-4148">Chao LH</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)</fundingBody>
                <code>R35GM142553</code>
                <country>United States</country>
            </grantReference>
            <grantReference>
                <fundingBody>National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)</fundingBody>
                <code>R01DK125263</code>
                <country>United States</country>
            </grantReference>
            <grantReference>
                <fundingBody>National Institutes of Health/National Cancer Institute (NIH/NCI)</fundingBody>
                <code>R37CA248565</code>
                <country>United States</country>
            </grantReference>
            <grantReference>
                <fundingBody>Jane Coffin Childs (JCC) Fund</fundingBody>
                <code>243493</code>
                <country>United States</country>
            </grantReference>
            <grantReference>
                <fundingBody>Swiss National Science Foundation</fundingBody>
                <code>P2BSP3_188112</code>
                <country>Switzerland</country>
            </grantReference>
            <grantReference>
                <fundingBody>Swiss National Science Foundation</fundingBody>
                <code>P400PB_199252</code>
                <country>Switzerland</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="GB">21.4</datasetSize>
        <entryDOI>10.6019/EMPIAR-11816</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>cell</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-43057</emdbEntry>
            <emdbEntry>EMD-43056</emdbEntry>
            <emdbEntry>EMD-43055</emdbEntry>
            <emdbEntry>EMD-43054</emdbEntry>
            <emdbEntry>EMD-43053</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0002-3209-5492" order="1">Fry MY</author>
                    <author authorORCID="0000-0002-9123-1132" order="2">Navarro PP</author>
                    <author authorORCID="0000-0002-9018-8179" order="3">Hakim P</author>
                    <author authorORCID="0000-0001-5590-1170" order="4">Ananda VY</author>
                    <author authorORCID="0000-0003-3263-0843" order="5">Qin X</author>
                    <author authorORCID="0000-0002-0318-6707" order="6">Landoni JC</author>
                    <author authorORCID="0000-0001-8839-1285" order="7">Rath S</author>
                    <author authorORCID="0000-0001-5564-1698" order="8">Inde Z</author>
                    <author authorORCID="0000-0003-4655-8096" order="9">Lugo CM</author>
                    <author authorORCID="0000-0002-0107-5181" order="10">Luce BE</author>
                    <author authorORCID="0000-0001-9135-9569" order="11">Ge Y</author>
                    <author authorORCID="0000-0002-3715-9619" order="12">McDonald JL</author>
                    <author authorORCID="0000-0003-2019-5645" order="13">Ali I</author>
                    <author authorORCID="0000-0003-4478-660X" order="14">Ha LL</author>
                    <author authorORCID="0000-0002-5469-0655" order="15">Kleinstiver BP</author>
                    <author authorORCID="0000-0002-0191-2154" order="16">Chan DC</author>
                    <author authorORCID="0000-0002-4618-5085" order="17">Sarosiek KA</author>
                    <author authorORCID="0000-0002-4849-4148" order="18">Chao LH</author>
                    <title>In situ architecture of Opa1-dependent mitochondrial cristae remodeling</title>
                    <journal>The EMBO journal</journal>
                    <journalAbbreviation>EMBO J</journalAbbreviation>
                    <country></country>
                    <issue>3</issue>
                    <volume>43</volume>
                    <firstPage>391</firstPage>
                    <lastPage>413</lastPage>
                    <year>2024</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s44318-024-00027-2</externalReferences>
                    <externalReferences type="pubmed">38225406</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame movies of tilt-series of cryo-FIB milled Mouse Embryonic Fibroblasts with OPA1 deletion and stable expression of OPA1 isoform 5</name>
        <directory>/data/EMPIAR</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>284</numImagesOrTiltSeries>
        <framesPerImage>6</framesPerImage>
        <frameRange>
            <frameRangeMin>1</frameRangeMin>
            <frameRangeMax>6</frameRangeMax>
        </frameRange>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>1.375</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>1.375</pixelHeight>
        </dimensions>
        <details>Unaligned multi-frame micrographs (EMD-430*/frames/*.tiff) corresponding to 5 tilt series with corresponding gain reference (gain/*dm4) and metadata (mdoc/*.mdoc). Data acquired on a K3 BioQuantum detector with no Volta phase plate. 

Acquisition parameters differ for each dataset (named after the corresponding EMDB accession code) and are specified below. 

EMD-43053:
63 tilts in the series.

EMD-43054:
62 tilts in the series

EMD-43055:
63 tilts in the series

EMD-43056:
48 tilts in the series

EMD-43057:
48 tilts in the series</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
