<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11730" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2023-10-12</depositionDate>
            <releaseDate>2024-09-03</releaseDate>
            <updateDate>2024-09-03</updateDate>
        </keyDates>
        <title>ATTRG47E amyloid fibrils from hereditary ATTR amloidosis</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-9442-460X</authorORCID>
            <firstName>Matthias</firstName>
            <lastName>Schmidt</lastName>
            <organization type="academic">Institut für Proteinbiochemie, Universität Ulm</organization>
            <street>8/1 Helmholtzstrasse</street>
            <townOrCity>Ulm</townOrCity>
            <stateOrProvince>Baden Württemberg</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>89081</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-2123-6816</authorORCID>
            <firstName>Marcus</firstName>
            <lastName>Fändrich</lastName>
            <organization type="academic">Institut für Proteinbiochemie, Universität Ulm</organization>
            <street>8/1 Helmholtzstrasse</street>
            <townOrCity>Ulm</townOrCity>
            <stateOrProvince>Baden Württemberg</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>89081</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-0582-3909">Steinebrei M</author>
            <author authorORCID="0000-0002-9442-460X">Schmidt M</author>
            <author authorORCID="0000-0003-2123-6816">Fändrich M</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>German Research Foundation (DFG)</fundingBody>
                <code>FA 456/28</code>
                <country>Germany</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">6.8</datasetSize>
        <entryDOI>10.6019/EMPIAR-11730</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-17737</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0002-0582-3909" order="1">Steinebrei M</author>
                    <author order="2">Baur J</author>
                    <author order="3">Pradhan A</author>
                    <author order="4">Kupfer N</author>
                    <author authorORCID="0000-0001-5697-2608" order="5">Wiese S</author>
                    <author authorORCID="0000-0003-1917-6746" order="6">Hegenbart U</author>
                    <author authorORCID="0000-0002-4853-5579" order="7">Schönland SO</author>
                    <author authorORCID="0000-0002-9442-460X" order="8">Schmidt M</author>
                    <author authorORCID="0000-0003-2123-6816" order="9">Fändrich M</author>
                    <title>Common transthyretin-derived amyloid fibril structures in patients with hereditary ATTR amyloidosis</title>
                    <journal>Nature communications</journal>
                    <journalAbbreviation>Nat Commun</journalAbbreviation>
                    <country></country>
                    <issue>1</issue>
                    <volume>14</volume>
                    <year>2023</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41467-023-43301-3</externalReferences>
                    <externalReferences type="pubmed">37993462</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame micrographs of ATTRVG47E amyloid fibrils</name>
        <directory>/data/Micrographs_raw_G47E</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>EER</headerFormat>
        <dataFormat>EER</dataFormat>
        <numImagesOrTiltSeries>12067</numImagesOrTiltSeries>
        <framesPerImage>2226</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>0.934</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>0.934</pixelHeight>
        </dimensions>
        <details>EMBL Heidelberg (25 November 2021)
IC-Krios1 300kV Cold FEG
SelectrisX Falcon4 10eV slit
Cs=2.7mm, C2aperture=50um, ObjAperture=100um
EFTEM 130K, nanoprobe spot 5, beam=650nm
Counting mode, 1pix=0.934A
9s exposure, EER files saved (2226 raw EER frames)
dose rate ~4e/pix/s at the sample level (~41.63 e/A2 total!)

4 shots per hole, no middle
defocus range -0.90 to -1.80um</details>
        <segmentationList/>
        <micrographsFilePattern>data/Micrographs_raw_G47E</micrographsFilePattern>
        <pickedParticlesFilePattern>data/ManualPick_G47E/20211125_Ulm_VID30247/11-A_001_manualpick.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/ManualPick_G47E</pickedParticlesDirectory>
    </imageSet>
</entry>
