<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11538" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2023-04-27</depositionDate>
            <releaseDate>2024-04-30</releaseDate>
            <updateDate>2024-04-30</updateDate>
        </keyDates>
        <title>Cryo electron tomography - tilt-series of FIB-milled HEK293T cells under untreated and HHT-treated conditions</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-7397-1321</authorORCID>
            <firstName>Martin</firstName>
            <lastName>Beck</lastName>
            <organization type="academic">Max Planck Institute of Biophysics</organization>
            <street>Max-von-Laue-Str. 3</street>
            <townOrCity>Frankfurt</townOrCity>
            <stateOrProvince>Hessen</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>60438</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-7397-1321</authorORCID>
            <firstName>Martin</firstName>
            <lastName>Beck</lastName>
            <organization type="academic">Max Planck Institute of Biophysics</organization>
            <street>Max-von-Laue-Str. 3</street>
            <townOrCity>Frankfurt</townOrCity>
            <stateOrProvince>Hessen</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>60438</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-8622-0252">Xing H</author>
            <author authorORCID="0000-0002-6049-6664">Welsch S</author>
            <author authorORCID="0000-0002-5457-4478">Turonova B</author>
            <author authorORCID="0000-0002-7397-1321">Beck M</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>Max Planck Society</fundingBody>
                <code>none</code>
                <country>Germany</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">1.3</datasetSize>
        <entryDOI>10.6019/EMPIAR-11538</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>cell</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-16721</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="false" preprint="true">
                    <author authorORCID="0000-0002-8622-0252" order="1">Xing H</author>
                    <author authorORCID="0000-0002-6049-6664" order="2">Welsch S</author>
                    <author authorORCID="0000-0002-5457-4478" order="3">Turoňová B</author>
                    <author authorORCID="0000-0002-7397-1321" order="4">Beck M</author>
                    <title>Translation dynamics in human cells visualized at high-resolution reveal cancer drug action</title>
                    <journal></journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country></country>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Tilt-series of FIB-milled HEK293T cells under native and HHT-treated conditions</name>
        <directory>/data</directory>
        <category>tilt series</category>
        <headerFormat>MRC</headerFormat>
        <dataFormat>MRC</dataFormat>
        <numImagesOrTiltSeries>710</numImagesOrTiltSeries>
        <framesPerImage>59</framesPerImage>
        <voxelType>SIGNED 16 BIT INTEGER</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>1.188</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>1.188</pixelHeight>
        </dimensions>
        <details>All mdoc files corresponding to the tilt-series are provided. Tilt series were acquired on a Titan Krios G4 (Thermo Fisher Scientific) operated at 300kV and equipped with Selectris X imaging filter and Falcon 4 direct electron detector, at 4K x 4K pixel dimensions, tilt range of -60° to 60°, 2° tilt increment, target defocus of -1.5 to -4.5 μm and a total dose of 120 to 150 e/Å2 per tilt series, using SerialEM software. There are 30-61 tilts per tilt series, which depends on when the tilt series data collection finished or failed. Target areas were selected in the cytoplasmic region of the cell.</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
