<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11200" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2022-09-01</depositionDate>
            <releaseDate>2024-06-06</releaseDate>
            <updateDate>2024-06-06</updateDate>
        </keyDates>
        <title>Mycobacterium phage Adephagia</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-9227-9461</authorORCID>
            <firstName>Simon</firstName>
            <middleName>James</middleName>
            <lastName>White</lastName>
            <organization type="academic">University of Connecticut</organization>
            <street>95 North Eagleville Road</street>
            <townOrCity>Storrs</townOrCity>
            <stateOrProvince>Connecticut</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>06269</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-9227-9461</authorORCID>
            <firstName>Simon</firstName>
            <middleName>James</middleName>
            <lastName>White</lastName>
            <organization type="academic">University of Connecticut</organization>
            <street>95 North Eagleville Road</street>
            <townOrCity>Storrs</townOrCity>
            <stateOrProvince>Connecticut</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>06269</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0003-2717-3182">Podgorski JM</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody></fundingBody>
                <code></code>
                <country></country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">1.8</datasetSize>
        <entryDOI>10.6019/EMPIAR-11200</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>virus</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-28012</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0003-2717-3182" order="1">Podgorski JM</author>
                    <author order="2">Freeman K</author>
                    <author order="3">Gosselin S</author>
                    <author order="4">Huet A</author>
                    <author order="5">Conway JF</author>
                    <author order="6">Bird M</author>
                    <author order="7">Grecco J</author>
                    <author order="8">Patel S</author>
                    <author order="9">Jacobs-Sera D</author>
                    <author order="10">Hatfull G</author>
                    <author order="11">Gogarten JP</author>
                    <author order="12">Ravantti J</author>
                    <author authorORCID="0000-0002-9227-9461" order="13">White SJ</author>
                    <title>A structural dendrogram of the actinobacteriophage major capsid proteins provides important structural insights into the evolution of capsid stability</title>
                    <journal>Structure (London, England : 1993)</journal>
                    <journalAbbreviation>Structure</journalAbbreviation>
                    <country></country>
                    <year>2023</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1016/j.str.2022.12.012</externalReferences>
                    <externalReferences type="pubmed">36649709</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Raw multi-frame images.</name>
        <directory>/data</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>5688</numImagesOrTiltSeries>
        <framesPerImage>50</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.4008</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.4008</pixelHeight>
        </dimensions>
        <details>######################################################################################
####################### METADATA INFO FOR PNCC USERS #################################
######################################################################################
assesments:
  contamination: null
  ice quality: null
  sample dispersity: null
metadata:
  program:
    aberration_correction_value: 2.7
    instrument_id: 34290
    proposal_id: 51282
    session_id: data
    short_sample_name: Adephagia_3_data
    voltage: 300
nominal_dose_rate_eps: null
notes: '

  multiline comments can be inserted here'
 
######################################################################################
########## HEADER INFO ON SELECT ONE MOVIE FROM  THE DATASET UNDER FRAMES/ ###########
######################################################################################

 RO image file on unit   1 : frames/stack_00009_X-1Y-1-0.tif     Size=     346072 K

                    This is a TIFF file.

 Number of columns, rows, sections .....   11520    8184      50
 Map mode ..............................    0   (byte)                     
 Start cols, rows, sects, grid x,y,z ...    0     0     0   11520   8184     50
 Pixel spacing (Angstroms)..............  0.4008     0.4008     0.4008    
 Cell angles ...........................   90.000   90.000   90.000
 Fast, medium, slow axes ...............    X    Y    Z
 Origin on x,y,z .......................    0.000       0.000       0.000    
 Minimum density .......................   0.0000                               
 Maximum density .......................   87.000                               
 Mean density ..........................   43.500                               
 tilt angles (original,current) ........   0.0   0.0   0.0   0.0   0.0   0.0
 Space group,# extra bytes,idtype,lens .        0        0        0        0

     0 Titles :

######################################################################################
##########################  PIXEL SIZE AND EXPOSURE DOSAGE  ##########################
######################################################################################
  

Nominal Pixel Size, A: 0.4008
Exposure dose per frame, e-/A^2: 0.488668371839
Total exposure dose, e-/A^2: 24.433418592</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
