<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10664" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2021-03-07</depositionDate>
            <releaseDate>2021-11-12</releaseDate>
            <updateDate>2022-02-25</updateDate>
        </keyDates>
        <title>Disease variant M854K MDA5-dsRNA filaments in complex with ADP-AlF4</title>
        <correspondingAuthor>
            <authorORCID>0000-0002-6084-0429</authorORCID>
            <firstName>Yorgo</firstName>
            <lastName>Modis</lastName>
            <organization type="academic">Molecular Immunity Unit, Department of Medicine, University of Cambridge, MRC Laboratory of Molecular Biology</organization>
            <street>Francis Crick Avenue, Cambridge Biomedical Campus</street>
            <townOrCity>Cambridge</townOrCity>
            <stateOrProvince>Cambridgeshire</stateOrProvince>
            <country>United Kingdom</country>
            <postOrZipCode>CB2 0QH</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator>
            <authorORCID>0000-0002-6084-0429</authorORCID>
            <firstName>Yorgo</firstName>
            <lastName>Modis</lastName>
            <organization type="academic">Molecular Immunity Unit, Department of Medicine, University of Cambridge, MRC Laboratory of Molecular Biology</organization>
            <street>Francis Crick Avenue, Cambridge Biomedical Campus</street>
            <townOrCity>Cambridge</townOrCity>
            <stateOrProvince>Cambridgeshire</stateOrProvince>
            <country>United Kingdom</country>
            <postOrZipCode>CB2 0QH</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0001-9265-632X">Yu Q</author>
            <author authorORCID="0000-0002-6084-0429">Modis Y</author>
        </authorsList>
        <datasetSize units="TB">2.5</datasetSize>
        <entryDOI>10.6019/EMPIAR-10664</entryDOI>
        <experimentType>EMDB</experimentType>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-12288</emdbEntry>
            <emdbEntry>EMD-12294</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0001-9265-632X" order="1">Yu Q</author>
                    <author authorORCID="0000-0001-8153-6146" order="2">Herrero Del Valle A</author>
                    <author authorORCID="0000-0001-8397-0202" order="3">Singh R</author>
                    <author authorORCID="0000-0002-6084-0429" order="4">Modis Y</author>
                    <title>MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA</title>
                    <journal>Nature communications</journal>
                    <journalAbbreviation>Nat Commun</journalAbbreviation>
                    <country>United States</country>
                    <issue>1</issue>
                    <volume>12</volume>
                    <year>2021</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41467-021-27062-5</externalReferences>
                    <externalReferences type="pubmed">34795277</externalReferences>
                    <details>Raw movies containing 60 frames per movie (accumulating 29.6 electrons per square Angstrom, over 60 s).</details>
                </journalCitation>
            </universalCitation>
            <universalCitation>
                <journalCitation published="true" preprint="true">
                    <author authorORCID="0000-0001-9265-632X" order="1">Yu Q</author>
                    <author authorORCID="0000-0001-8153-6146" order="2">Herrero Del Valle A</author>
                    <author authorORCID="0000-0001-8397-0202" order="3">Singh R</author>
                    <author authorORCID="0000-0002-6084-0429" order="4">Modis Y</author>
                    <title>MDA5 autoimmune disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA</title>
                    <journal>bioRxiv</journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country>United States</country>
                    <year>2021</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1101/2021.02.01.429133</externalReferences>
                    <details>Raw movies containing 60 frames per movie (accumulating 29.6 electrons per square Angstrom, over 60 s).</details>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame micrographs of MDA5 variant M854K bound to dsRNA and ADP-ALF4</name>
        <directory>/data</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>2177</numImagesOrTiltSeries>
        <framesPerImage>60</framesPerImage>
        <voxelType>SIGNED 16 BIT INTEGER</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>1.084</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>1.084</pixelHeight>
        </dimensions>
        <details>Particle positions used for final reconstruction are in corresponding *particles.star files.
Each raw movie contain 60 unaligned frames (accumulating 29.6 electrons per square Å in a 60s exposure).</details>
        <segmentationList/>
        <micrographsFilePattern>data/FoilHole_2*_Fractions.tif</micrographsFilePattern>
        <pickedParticlesFilePattern>data/coordinate/*particles.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/coordinate</pickedParticlesDirectory>
    </imageSet>
</entry>
