<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10508" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2020-08-27</depositionDate>
            <releaseDate>2021-10-01</releaseDate>
            <updateDate>2022-01-31</updateDate>
        </keyDates>
        <title>Cryo-EM structure of the SpCas9 delta4CE Ternary Complex</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0001-8943-1330</authorORCID>
            <firstName>Thomas</firstName>
            <middleName>Gerard</middleName>
            <lastName>Laughlin</lastName>
            <organization type="academic">Department of Molecular &amp;amp; Cell Biology, Division of Biochemistry, Biophysics and Structural Biology, University of California-Berkeley</organization>
            <townOrCity>Berkeley</townOrCity>
            <stateOrProvince>CA</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>94702</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-0042-2257</authorORCID>
            <firstName>David</firstName>
            <lastName>Savage</lastName>
            <organization type="academic">Department of Molecular &amp;amp; Cell Biology, Division of Biochemistry, Biophysics and Structural Biology, University of California-Berkeley</organization>
            <townOrCity>Berkeley</townOrCity>
            <stateOrProvince>CA</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>94702</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0001-8943-1330">Laughlin TG</author>
            <author authorORCID="0000-0002-0151-0593">Shams A</author>
            <author authorORCID="0000-0003-0042-2257">Savage DF</author>
        </authorsList>
        <datasetSize units="TB">1.5</datasetSize>
        <entryDOI>10.6019/EMPIAR-10508</entryDOI>
        <experimentType>EMDB</experimentType>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-22518</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0002-0151-0593" order="1">Shams A</author>
                    <author order="2">Higgins SA</author>
                    <author authorORCID="0000-0002-9545-5723" order="3">Fellmann C</author>
                    <author authorORCID="0000-0001-8943-1330" order="4">Laughlin TG</author>
                    <author order="5">Oakes BL</author>
                    <author order="6">Lew R</author>
                    <author order="7">Kim S</author>
                    <author order="8">Lukarska M</author>
                    <author authorORCID="0000-0003-0130-4789" order="9">Arnold M</author>
                    <author order="10">Staahl BT</author>
                    <author authorORCID="0000-0001-9161-999X" order="11">Doudna JA</author>
                    <author authorORCID="0000-0003-0042-2257" order="12">Savage DF</author>
                    <title>Comprehensive deletion landscape of CRISPR-Cas9 identifies minimal RNA-guided DNA-binding modules</title>
                    <journal>Nature communications</journal>
                    <journalAbbreviation>Nat Commun</journalAbbreviation>
                    <country></country>
                    <issue>1</issue>
                    <volume>12</volume>
                    <year>2021</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41467-021-25992-8</externalReferences>
                    <externalReferences type="pubmed">34580310</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame, non-gain-corrected frames in LZW-TIFF of SpCas9 delta4CE Ternary Complex</name>
        <directory>/data/frames</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>MRC</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>2570</numImagesOrTiltSeries>
        <framesPerImage>60</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.45</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.45</pixelHeight>
        </dimensions>
        <details>LZW-TIFF, non-gain-corrected, super-resolution K3 multi-frame movies containing 60 frames with cumulative, uniform exposure of 60 electrons per square Angstrom. Gain-reference provided in frame directory as dm4 format. Final particle positions and orientations provided as run_data.star from RELION-3.1b. Data collected using SerialEM with a 3x3 image-shift pattern and beam tilt compensation, but 9th position was systematically poor and removed yielding 8 image-shift groups as marked by the trailing 4 digit-identifier of each movie file.</details>
        <segmentationList/>
        <micrographsFilePattern>data/frames/*.tif</micrographsFilePattern>
        <pickedParticlesFilePattern>data/run_data.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
