<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10346" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2020-01-09</depositionDate>
            <releaseDate>2020-03-10</releaseDate>
            <updateDate>2020-03-10</updateDate>
        </keyDates>
        <title>Cryo-EM of GLP-1 receptor bound to TT-OAD2 non-peptidic agonist</title>
        <correspondingAuthor private="true">
            <firstName>Denise</firstName>
            <lastName>Wootten</lastName>
            <organization type="academic">Drug Discovery Biology, Monash Institute of Pharmaceutical Sciences, Monash University</organization>
            <street>399 Royal Parade</street>
            <townOrCity>Parkville</townOrCity>
            <stateOrProvince>Victoria</stateOrProvince>
            <country>Australia</country>
            <postOrZipCode>3052</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <firstName>Denise</firstName>
            <lastName>Wootten</lastName>
            <organization type="academic">Drug Discovery Biology, Monash Institute of Pharmaceutical Sciences, Monash University</organization>
            <street>399 Royal Parade</street>
            <townOrCity>Parkville</townOrCity>
            <stateOrProvince>Victoria</stateOrProvince>
            <country>Australia</country>
            <postOrZipCode>3052</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author>Zhao P</author>
            <author>Liang YL</author>
            <author>Belousoff MJ</author>
            <author authorORCID="0000-0001-8780-2986">Deganutti G</author>
            <author>Fletcher MM</author>
            <author>Willard FS</author>
            <author>Bell MG</author>
            <author>Christe ME</author>
            <author>Sloop KW</author>
            <author>Inoue A</author>
            <author>Truong TT</author>
            <author>Clydesdale L</author>
            <author authorORCID="0000-0001-8655-8221">Furness SGB</author>
            <author>Christopoulos A</author>
            <author>Wang MW</author>
            <author>Miller LJ</author>
            <author>Reynolds CA</author>
            <author>Danev R</author>
            <author>Sexton PM</author>
            <author>Wootten D</author>
        </authorsList>
        <datasetSize units="TB">6.2</datasetSize>
        <entryDOI>10.6019/EMPIAR-10346</entryDOI>
        <experimentType>EMDB</experimentType>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-20179</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author order="1">Zhao P</author>
                    <author order="2">Liang YL</author>
                    <author order="3">Belousoff MJ</author>
                    <author authorORCID="0000-0001-8780-2986" order="4">Deganutti G</author>
                    <author order="5">Fletcher MM</author>
                    <author order="6">Willard FS</author>
                    <author order="7">Bell MG</author>
                    <author order="8">Christe ME</author>
                    <author order="9">Sloop KW</author>
                    <author order="10">Inoue A</author>
                    <author order="11">Truong TT</author>
                    <author order="12">Clydesdale L</author>
                    <author authorORCID="0000-0001-8655-8221" order="13">Furness SGB</author>
                    <author order="14">Christopoulos A</author>
                    <author order="15">Wang MW</author>
                    <author order="16">Miller LJ</author>
                    <author order="17">Reynolds CA</author>
                    <author order="18">Danev R</author>
                    <author order="19">Sexton PM</author>
                    <author order="20">Wootten D</author>
                    <title>Activation of the GLP-1 receptor by a non-peptidic agonist</title>
                    <journal>Nature</journal>
                    <journalAbbreviation>Nature</journalAbbreviation>
                    <country></country>
                    <issue>7790</issue>
                    <volume>577</volume>
                    <firstPage>432</firstPage>
                    <lastPage>436</lastPage>
                    <year>2020</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41586-019-1902-z</externalReferences>
                    <externalReferences type="pubmed">31915381</externalReferences>
                    <details>Original gain-normalized moves in LZW-compressed TIFF format.</details>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame movies of GLP-1R-TT-OAD2 complex</name>
        <directory>/data/20181213_PS2.3.3</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>4259</numImagesOrTiltSeries>
        <framesPerImage>67</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.413</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.413</pixelHeight>
        </dimensions>
        <details>- Approximately two-thirds of the data were collected with the Volta phase plate (VPP). "VPP" in the filename indicates that the movie was collected with the phase plate.
- Most movies were collected with a 9-hole beam-image shift acquisition pattern. The filename of such movies contains a four digit number in the range 0000 to 0008 corresponding to the image-shift acquisition position.
- The image-shift induced beam-tilt was not compensated optically during acquisition. For best results, perform per-image-shift position beam-tilt measurement and correction with CTF refinement. 
- The movies were recorded with Gatan K3 camera in super-resolution mode and saved as gain-normalized LZW compressed TIFF files by SerialEM.
- Accelerating voltage: 300 kV
- Spherical aberration: 2.7 mm
- SuperRes pixel size: 0.413 A/superpixel
- Physical pixel size: 0.826 A/physpix
- Exposure rate: 10.9 e/physpix/s
- Exposure rate: 16.0 e/A^2/s
- Exposure time: 4.015 s
- Total exposure: 64.2 e/A^2
- Number of frames: 67
- Defocus range: 0.3 - 1.4 um</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Unaligned multi-frame movies of GLP-1R-TT-OAD2 complex</name>
        <directory>/data/PS.TT.3</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>3159</numImagesOrTiltSeries>
        <framesPerImage>62</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>5760</imageWidth>
            <pixelWidth>0.826</pixelWidth>
            <imageHeight>4092</imageHeight>
            <pixelHeight>0.826</pixelHeight>
        </dimensions>
        <details>- The movies were recorded with Gatan K3 camera in counting (non-superres) mode and saved as gain-normalized LZW compressed TIFF files by SerialEM.
- All movies were collected with a 9-hole beam-image shift acquisition pattern. The filename contains a four digit number in the range 0000 to 0008 corresponding to the image-shift acquisition position.
- The image-shift induced beam-tilt was not compensated optically during acquisition. For best results, perform per-image-shift position beam-tilt measurement and correction with CTF refinement. 
- Accelerating voltage: 300 kV
- Spherical aberration: 2.7 mm
- Pixel size: 0.826 A/pix
- Exposure rate: 12.2 e/physpix/s
- Exposure rate: 17.9 e/A^2/s
- Exposure time: 3.715 s
- Total exposure: 66.5 e/A^2
- Number of frames: 62
- Defocus range: 0.6 - 1.5 um</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
